The detailed information of tRNA gene sequence


Sequence ID>C171089101
Genome IDCP019082
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPaludisphaera borealis PX4 [CP019082]
Start position on genome 7008681
End posion on genome 7008583
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gattaagttt
tRNA gene sequence 
GGGAGCGTGTGGCCGGCTGGTGCCGCCCTCGGTCTTCAAAACCGATGAGGGATCGTGAAA
GCGACCCCTGGTGGGTTCGATTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
tcgcagccgt
Secondary structure (Cloverleaf model)
>C171089101	SeC(p)	TCA
                   t      GCCA tcgcagccgt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T A C C C     A
      C G G        T      + | | | |     G
    T       C C G G       G T G G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGAGGGATCGTGAAAGCGACCCCTG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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