The detailed information of tRNA gene sequence


Sequence ID>C171091639
Genome IDCP019236
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesRhodoferax koreense DCY-110 [CP019236]
Start position on genome 3903193
End posion on genome 3903280
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcgaccgct
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCTCGCAAGGGCCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
tcttttggcg
Secondary structure (Cloverleaf model)
>C171091639	Ser	TGA
                   t      GCCA tcttttggcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCTCGCAAGGGCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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