The detailed information of tRNA gene sequence


Sequence ID>C171092167
Genome IDCP019322
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens PSBB040 [CP019322]
Start position on genome 2665511
End posion on genome 2665435
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgcgccgt
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTCAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
cggcgcccac
Secondary structure (Cloverleaf model)
>C171092167	Trp	CCA
                   t      GCCA cggcgcccac
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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