The detailed information of tRNA gene sequence


Sequence ID>C171094369
Genome IDCP019437
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThioclava nitratireducens 25B10_4 [CP019437]
Start position on genome 2082095
End posion on genome 2082006
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccctgatgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCGGTGAGAGCCGA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ctttccccgg
Secondary structure (Cloverleaf model)
>C171094369	Ser	CGA
                   c      GCCA ctttccccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCGGTGAGAGCCGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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