The detailed information of tRNA gene sequence


Sequence ID>C171097438
Genome IDCP019630
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseibium aggregatum RMAR6-6 [CP019630]
Start position on genome 1000793
End posion on genome 1000882
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caagtaccgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGAGCGCGCAAGCGTT
CCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tatctatcct
Secondary structure (Cloverleaf model)
>C171097438	Ser	CGA
                   c      GCCA tatctatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGAGCGCGCAAGCGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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