The detailed information of tRNA gene sequence


Sequence ID>C171099919
Genome IDCP019791
Search identical group
Phylum/ClassPlanctomycetota
SpeciesAnaerohalosphaera lusitana ST-NAGAB-D1 [CP019791]
Start position on genome 1586113
End posion on genome 1586019
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttgctctc
tRNA gene sequence 
GGAGGTGATTGGTGCCTGGTGGTGCCCCTGGTCTTCAAAACCAGTGTTGGGCTGAGAAAG
TCCTGGGTGGGTTCGATTCCCATTCGCCTCCGCCA
Downstream region at tRNA end position 
ttttttgaat
Secondary structure (Cloverleaf model)
>C171099919	SeC(p)	TCA
                   c      GCCA ttttttgaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T          T T
                    T     T A C C C     A
      T C C        T      + | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    T       T G C C
      G G          C     TGTTGGGCTGAGAAAGTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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