The detailed information of tRNA gene sequence


Sequence ID>C171100903
Genome IDCP019915
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. 'Soap Lake #7' [CP019915]
Start position on genome 78953
End posion on genome 79029
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atgtagtagt
tRNA gene sequence 
GGACCGGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tcatcagttt
Secondary structure (Cloverleaf model)
>C171100903	Asp	GTC
                   t      GCCA tcatcagttt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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