The detailed information of tRNA gene sequence


Sequence ID>C171101103
Genome IDCP019936
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesChromatiaceae bacterium 2141T.STBD.0c.01a [CP019936]
Start position on genome 3652226
End posion on genome 3652134
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcacagattt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTAATAGCT
CCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattccgggc
Secondary structure (Cloverleaf model)
>C171101103	Ser	GCT
                   t      GCCA tattccgggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTAATAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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