The detailed information of tRNA gene sequence


Sequence ID>C171101413
Genome IDCP019947
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas sp. CC6-YY-74 [CP019947]
Start position on genome 1520616
End posion on genome 1520706
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaaaaatct
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCGAACGTTAGTAGCGT
TTCTAGGGTTCGAATCCCTAGCCCTCCACCA
Downstream region at tRNA end position 
tatagatgta
Secondary structure (Cloverleaf model)
>C171101413	Ser	TGA
                   t      ACCA tatagatgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     A T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       T A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAACGTTAGTAGCGTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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