The detailed information of tRNA gene sequence


Sequence ID>C171103248
Genome IDCP020046
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesThiomonas intermedia ATCC 15466 [CP020046]
Start position on genome 3127717
End posion on genome 3127643
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacacgattc
tRNA gene sequence 
GGGCGGTTAACTCAGCGGTAGAGTGCCACCTTCACACGGTGGAAGCCACTGGTTCGATCC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
gttcattgtt
Secondary structure (Cloverleaf model)
>C171103248	Val	CAC
                   c      ACCA gttcattgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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