The detailed information of tRNA gene sequence


Sequence ID>C171105868
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 3355440
End posion on genome 3355532
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcctcgaaC
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGCCGAACGGGCTCGCCTGGAAAGCGAGTGTACCCTTCACGGGG
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCC
Downstream region at tRNA end position 
ggccgggttg
Secondary structure (Cloverleaf model)
>C171105868	Ser	GGA
                   C      GCCC ggccgggttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACCCTTCACGGGGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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