The detailed information of tRNA gene sequence


Sequence ID>C171105871
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 3728009
End posion on genome 3728101
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggcagcga
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGGCAAAACCC
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCCG
Downstream region at tRNA end position 
catgcaggaa
Secondary structure (Cloverleaf model)
>C171105871	Ser	GCT
                   a      GCCG catgcaggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCAAAACCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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