The detailed information of tRNA gene sequence


Sequence ID>C171105872
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 4134574
End posion on genome 4134648
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tccaaaattc
tRNA gene sequence 
GGGTCCTTAGCTCAGCTGGTTAGAGCGCTACGTTGACATCGTAGAGGTCGGTGGTTCGAG
TCCACTAGGACCCACat
Downstream region at tRNA end position 
gctatcccct
Secondary structure (Cloverleaf model)
>C171105872	Val	GAC
                   c      ACat gctatcccct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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