The detailed information of tRNA gene sequence


Sequence ID>C171105878
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 3119860
End posion on genome 3119786
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtgggctcct
tRNA gene sequence 
GCGCCTGTAGCTCAACCGGATAGAGCAGCGGACTTCTAATCCGCAGGTTGCAGGTTCGAG
TCCTGCCGGGCGCGCtg
Downstream region at tRNA end position 
cgcaaacata
Secondary structure (Cloverleaf model)
>C171105878	Arg	TCT
                   t      GCtg cgcaaacata
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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