The detailed information of tRNA gene sequence


Sequence ID>C171105879
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 3119755
End posion on genome 3119684
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgcccgatcc
tRNA gene sequence 
GGTGCCGTGGCCGAGTGGTTAGGCAAAGGTCTGCAAAACCTTGTACGGCGGTTCGAATCC
GCCCGGCACCTCgt
Downstream region at tRNA end position 
ctgatcgacg
Secondary structure (Cloverleaf model)
>C171105879	Cys	GCA
                   c      TCgt ctgatcgacg
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T T        A     GTAC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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