The detailed information of tRNA gene sequence


Sequence ID>C171105883
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 2454144
End posion on genome 2454056
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcatggttcC
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCGAATGCACTGGTCTTGAAAACCAGCGTACCGCAAGGTACC
GTGGGTTCGAATCCCACCCCCTCCGCCC
Downstream region at tRNA end position 
gtcaggtcgt
Secondary structure (Cloverleaf model)
>C171105883	Ser	TGA
                   C      GCCC gtcaggtcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGTACCGCAAGGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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