The detailed information of tRNA gene sequence


Sequence ID>C171105928
Genome IDCP020384
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodovulum sp. MB263 [CP020384]
Start position on genome 2275922
End posion on genome 2275833
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaccgatcac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAACGCGTGTAGGCGGGTAACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttaacccta
Secondary structure (Cloverleaf model)
>C171105928	Ser	GGA
                   c      GCCA cttaacccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGTAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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