The detailed information of tRNA gene sequence


Sequence ID>C171106365
Genome IDCP020408
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae FDAARGOS_223 [CP020407, CP020408]
Start position on genome 208688
End posion on genome 208603
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cttttgacac
tRNA gene sequence 
GCGGTGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTCGGACGTGA
GGGTTCAAGTCCCTCCTTCCGCACCA
Downstream region at tRNA end position 
aatgcatcga
Secondary structure (Cloverleaf model)
>C171106365	Leu	CAG
                   c      ACCA aatgcatcga
                     G - C
                     C - G
                     G - C
                     G - C
                     T   T
                     G + T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCTTCGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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