The detailed information of tRNA gene sequence


Sequence ID>C171108679
Genome IDCP020474
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseovarius mucosus SMR3 [CP020474]
Start position on genome 3542131
End posion on genome 3542044
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctaaggcat
tRNA gene sequence 
GGAAGCTTGGCAGAGTGGTCGATTGCACTGGTCTTGAAAACCAGCGTACCGAGAGGTACC
CAGGGTTCGAATCCCTGAGCTTCCGCCA
Downstream region at tRNA end position 
aaaacccctg
Secondary structure (Cloverleaf model)
>C171108679	Ser	TGA
                   t      GCCA aaaacccctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGTACCGAGAGGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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