The detailed information of tRNA gene sequence


Sequence ID>C171110761
Genome IDCP020612
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus contaminans RKI 16-01929T [CP020612]
Start position on genome 1311426
End posion on genome 1311521
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cggcacctga
tRNA gene sequence 
GGAGGAGAATCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGAGGCAGCGCGCCT
GTCTCGGGTGGGTTCGACTCCCATTCTCCTCCGCCA
Downstream region at tRNA end position 
gcggggcgat
Secondary structure (Cloverleaf model)
>C171110761	SeC(p)	TCA
                   a      GCCA gcggggcgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGAGGCAGCGCGCCTGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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