The detailed information of tRNA gene sequence


Sequence ID>C171111937
Genome IDCP020738
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia ubonensis subsp. mesacidophila ATCC 31433 [CP020737, CP020738, CP020739]
Start position on genome 1184017
End posion on genome 1184112
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttccccag
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCTGGACTTCAAATCCAGTTAGGGGTGTCAGACG
CTCCTAGGTAGGTTCGACTCCTGCTGCTTTCCGCCA
Downstream region at tRNA end position 
taacgcttca
Secondary structure (Cloverleaf model)
>C171111937	SeC(p)	TCA
                   g      GCCA taacgcttca
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T A G G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTAGGGGTGTCAGACGCTCCTAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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