The detailed information of tRNA gene sequence


Sequence ID>C171112452
Genome IDCP020809
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium dioxanotrophicus PH-06 [CP020809]
Start position on genome 6490034
End posion on genome 6489939
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gttgagcggc
tRNA gene sequence 
GGAGGCGTTTGGGTTCCTGGTGGTCCCCCCGGTCTTCAAAACCGGTGAGATCGAGTATCT
CGGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
gtttctgctg
Secondary structure (Cloverleaf model)
>C171112452	SeC(p)	TCA
                   c      GCCA gtttctgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       T C C C
      T G G        C     TGAGATCGAGTATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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