The detailed information of tRNA gene sequence


Sequence ID>C171114638
Genome IDCP020906
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium etli NXC12 [CP020906]
Start position on genome 1934197
End posion on genome 1934123
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aggctggcct
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGACAGATTCTCATTCTGTAAAGAGGGGTTCGATTC
CCCTAGGGCGTACCA
Downstream region at tRNA end position 
tcgcgcttat
Secondary structure (Cloverleaf model)
>C171114638	Glu	CTC
                   t      ACCA tcgcgcttat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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