The detailed information of tRNA gene sequence


Sequence ID>C171114644
Genome IDCP020906
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium etli NXC12 [CP020906]
Start position on genome 528793
End posion on genome 528718
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gccgccaaat
tRNA gene sequence 
GCCGCTTTAGCTCAGTCGGTAGAGCACATCATTCGTAATGATGGGGTCACGTGTTCGAGT
CACGTAAGCGGCACCA
Downstream region at tRNA end position 
ttttttctac
Secondary structure (Cloverleaf model)
>C171114644	Thr	CGT
                   t      ACCA ttttttctac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G C A C     A
      T G A        A      | | | | |     G
    C       C T C G       A C G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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