The detailed information of tRNA gene sequence


Sequence ID>C171114691
Genome IDCP020917
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesAchromobacter denitrificans PR1 [CP020917]
Start position on genome 1866166
End posion on genome 1866071
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggccatcgc
tRNA gene sequence 
GGAAGGCATCCGTGCCCGGTGGCGCGGCTGGGCTTCAAACCCAGTTGGGGGCGTCAGACG
CTCCCAGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tctcttcccc
Secondary structure (Cloverleaf model)
>C171114691	SeC	TCA
                   c      GCCA tctcttcccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C C        C      | + | | |     G
    G       G T G C       G T A G G     C
    G       | + | |                 T T
    T       C G C G
      G G          G     TTGGGGGCGTCAGACGCTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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