The detailed information of tRNA gene sequence


Sequence ID>C171115121
Genome IDCP021030
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium sp. NXC14 [CP021030]
Start position on genome 201729
End posion on genome 201640
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacgccaaa
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTACGTGAAAGCGTA
CCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
ttttcgttaa
Secondary structure (Cloverleaf model)
>C171115121	Ser	GGA
                   a      GCCA ttttcgttaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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