The detailed information of tRNA gene sequence


Sequence ID>C171115730
Genome IDCP021108
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella genomosp. 8 AU19157 [CP021108]
Start position on genome 2162918
End posion on genome 2162994
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctcggtcttt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGAGTTCGAA
TCCCGCCGTCCCGACCA
Downstream region at tRNA end position 
gaaaaaaaca
Secondary structure (Cloverleaf model)
>C171115730	Pro	GGG
                   t      ACCA gaaaaaaaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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