The detailed information of tRNA gene sequence


Sequence ID>C171115914
Genome IDCP021112
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudorhodoplanes sinuspersici RIPI110 [CP021112]
Start position on genome 585329
End posion on genome 585418
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacccgcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
actgctctgt
Secondary structure (Cloverleaf model)
>C171115914	Ser	GGA
                   c      GCCA actgctctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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