The detailed information of tRNA gene sequence


Sequence ID>C171115924
Genome IDCP021112
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudorhodoplanes sinuspersici RIPI110 [CP021112]
Start position on genome 4322352
End posion on genome 4322426
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgcccgccgt
tRNA gene sequence 
GCCGGCATAGCTCAGCGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGGGAGTTCAATCC
TCTCTGCCGGCACCA
Downstream region at tRNA end position 
ctgcggcccc
Secondary structure (Cloverleaf model)
>C171115924	Thr	TGT
                   t      ACCA ctgcggcccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     C T C T C     A
        G A        A      | + | | |     A
      C     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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