The detailed information of tRNA gene sequence


Sequence ID>C171115938
Genome IDCP021112
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudorhodoplanes sinuspersici RIPI110 [CP021112]
Start position on genome 5000767
End posion on genome 5000843
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccatcggtt
tRNA gene sequence 
CGGGGCATAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCAAGTTCGAA
TCTTGCTGCCCCGACCA
Downstream region at tRNA end position 
acaacccctt
Secondary structure (Cloverleaf model)
>C171115938	Pro	TGG
                   t      ACCA acaacccctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C G T T C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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