The detailed information of tRNA gene sequence


Sequence ID>C171115942
Genome IDCP021112
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudorhodoplanes sinuspersici RIPI110 [CP021112]
Start position on genome 4882987
End posion on genome 4882895
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtgcatgct
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCCGTCAAGGC
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atcgcgaagc
Secondary structure (Cloverleaf model)
>C171115942	Ser	GCT
                   t      GCCA atcgcgaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCCGTCAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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