The detailed information of tRNA gene sequence


Sequence ID>C171116162
Genome IDCP021132
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas fragi NMC25 [CP021132]
Start position on genome 3630061
End posion on genome 3629971
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgtgttgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACATCTCAAAAGGGT
GTCGGGGGTTCGAATCCCCCCTTCTCCGCCA
Downstream region at tRNA end position 
ttattcatgt
Secondary structure (Cloverleaf model)
>C171116162	Ser	GCT
                   c      GCCA ttattcatgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TACATCTCAAAAGGGTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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