The detailed information of tRNA gene sequence


Sequence ID>C171116288
Genome IDCP021138
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesSulfuriferula sp. AH1 [CP021138]
Start position on genome 1398359
End posion on genome 1398454
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcaccaaaac
tRNA gene sequence 
GGAAGGGATTCGCTCCCCGGTGGGGCGGCCGGACTTCAAATTCGGTTAAGCACGCCAGCG
TGCTTGGGTGGGTTCGACTCCCACTCCCTTCCGCCA
Downstream region at tRNA end position 
tcgcgccgat
Secondary structure (Cloverleaf model)
>C171116288	SeC	TCA
                   c      GCCA tcgcgccgat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C A C C C     A
      C C C        T      | | | | |     G
    C       T C G C       G T G G G     C
    G       + | | |                 T T
    G       G G C G
      T G G        G     TTAAGCACGCCAGCGTGCTTGG
                    C - G
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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