The detailed information of tRNA gene sequence


Sequence ID>C171117059
Genome IDCP021181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizorhabdus wittichii DC-6 [CP021181]
Start position on genome 5875572
End posion on genome 5875498
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gttgcagagt
tRNA gene sequence 
GGGCGCATAGCTCAGTGGTAGAGCACTGTGTTCACACCGCAGGGGTCGCAGGTTCAAACC
CTGCTGCGCCCACCA
Downstream region at tRNA end position 
ctctgctccc
Secondary structure (Cloverleaf model)
>C171117059	Val	CAC
                   t      ACCA ctctgctccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C A
                    T     C G T C C     A
        G A        A      | | | | |     A
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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