The detailed information of tRNA gene sequence


Sequence ID>C171127244
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 576829
End posion on genome 576915
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctcatagcT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGCTCGACTTGAAATCGAGTGTGCCGCAAGGCACC
GTGGGTTCGAATCCCACCCTCTCCGTat
Downstream region at tRNA end position 
gcctcagcca
Secondary structure (Cloverleaf model)
>C171127244	Ser	TGA
                   T      GTat gcctcagcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTGCCGCAAGGCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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