The detailed information of tRNA gene sequence


Sequence ID>C171127247
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 1210490
End posion on genome 1210565
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcggtatgt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
cggcaagaga
Secondary structure (Cloverleaf model)
>C171127247	Ala	TGC
                   t      ACCA cggcaagaga
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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