The detailed information of tRNA gene sequence


Sequence ID>C171127261
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 3899692
End posion on genome 3899774
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccaaatccac
tRNA gene sequence 
GGGCGGATGGCGAAATTGGTAGACGCACCACACTCAAAATGTGGCGGCCTCTGGCCATGA
GGGTTCGAGTCCCTCTCTGCCCAtgt
Downstream region at tRNA end position 
ccttactagc
Secondary structure (Cloverleaf model)
>C171127261	Leu	CAA
                   c      Atgt ccttactagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCCTCTGGCCAT
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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