The detailed information of tRNA gene sequence


Sequence ID>C171127279
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 2138223
End posion on genome 2138151
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cggacaacac
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGCGCTGCGATCGCACCGCAGAGGTCAGGGGTTCGAAT
CCCCTATTCTCCAttg
Downstream region at tRNA end position 
aaaactctgg
Secondary structure (Cloverleaf model)
>C171127279	Ala	CGC
                   c      Attg aaaactctgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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