The detailed information of tRNA gene sequence


Sequence ID>C171128406
Genome IDLT598653
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesuncultured Sphingopyxis sp. [LT598653]
Start position on genome 1007742
End posion on genome 1007817
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actccggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCGGGTTCGAGT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
ggccgttcga
Secondary structure (Cloverleaf model)
>C171128406	Trp	CCA
                   t      GCCA ggccgttcga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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