The detailed information of tRNA gene sequence


Sequence ID>C171129707
Genome IDLT629973
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesAkkermansia glycaniphila [LT629973]
Start position on genome 1145102
End posion on genome 1145015
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgttttagc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGCTTAAGGCACCCGACTCGAAATCGGACGTACGGCAACGTACC
GTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttcttt
Secondary structure (Cloverleaf model)
>C171129707	Ser	CGA
                   c      GCCA ttttttcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CGTACGGCAACGTACC
                    C   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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