The detailed information of tRNA gene sequence


Sequence ID>C171131403
Genome IDLT828648
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira japonica [LT828648]
Start position on genome 1300557
End posion on genome 1300646
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaaaattgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGACGAATCGACATGCTTGGAAAGCATGCGTCCCGGCAACGGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
taacagagta
Secondary structure (Cloverleaf model)
>C171131403	Ser	GGA
                   c      GCCA taacagagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    A       A T C G
      C G A        A     CGTCCCGGCAACGGGACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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