The detailed information of tRNA gene sequence


Sequence ID>C171131411
Genome IDLT828648
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira japonica [LT828648]
Start position on genome 2198242
End posion on genome 2198316
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gctgtcacgt
tRNA gene sequence 
AGGGGCATAGTGTTAATGGCAGCACGTCGGTCTCCAAAACCGAAAGTCTGGGTTCAAATC
CTAGTGCCCCTGCCA
Downstream region at tRNA end position 
agcagagttc
Secondary structure (Cloverleaf model)
>C171131411	Trp	CCA
                   t      GCCA agcagagttc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      A A T        A      | | + | |     A
    T       T G T G       C T G G G     C
    G       + | | |                 T T
    G       G C A C
      C A          G     AAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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