The detailed information of tRNA gene sequence


Sequence ID>C171131421
Genome IDLT828648
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira japonica [LT828648]
Start position on genome 3582938
End posion on genome 3582849
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaagaggat
tRNA gene sequence 
GGAGGGGTGACGGAGCGGCCGAACGTGCCGGTCTTGAAAACCGGAGACCTCGCAAGGGGT
CCGCGAGTTCAAATCTCGCCCCCTCCGCCA
Downstream region at tRNA end position 
tcaatcacgg
Secondary structure (Cloverleaf model)
>C171131421	Ser	TGA
                   t      GCCA tcaatcacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    G       G G C A       G C G A G     C
    G         | | |                 T T
    C       A C G T
      C G A        G     AGACCTCGCAAGGGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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