The detailed information of tRNA gene sequence


Sequence ID>C171131886
Genome IDLT859958
Search identical group
Phylum/ClassChloroflexota
SpeciesBrevefilum fermentans [LT859958]
Start position on genome 225034
End posion on genome 225122
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgcccgtT
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTTATTGGGGCGGTCTCGAAAACCGTTGTAGCCTTGCGGCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGTta
Downstream region at tRNA end position 
tcggcaatat
Secondary structure (Cloverleaf model)
>C171131886	Ser	CGA
                   T      GTta tcggcaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    T       T T G G
      T T A        G     TGTAGCCTTGCGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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