The detailed information of tRNA gene sequence


Sequence ID>C172000005
Genome IDCP010518
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea apista TF81F4 [CP010518]
Start position on genome 3492201
End posion on genome 3492297
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttcgtctaa
tRNA gene sequence 
AGGAAGGCATCCGTATCCGGTGATGCGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGTC
GCTCCCAGGTCGGTTCGACTCCGGCTGCTTTCCGCCAt
Downstream region at tRNA end position 
caagctttcg
Secondary structure (Cloverleaf model)
>C172000005	SeC	TCA
                   a      CCAt caagctttcg
                     A   G
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C          C C
                    C     G T C G G     T
    C T A T        A      | + | + +     C
  C         G C C T       C G G T T     A
  G         + |   +                 C G
  G         T G C G
    T G A          G     TTGGGGGCGTCAGTCGCTCCCAGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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