The detailed information of tRNA gene sequence


Sequence ID>C172000015
Genome IDCP013290
Search identical group
Phylum/ClassActinomycetota
SpeciesJanibacter indicus YFY001 [CP013290]
Start position on genome 3155200
End posion on genome 3155295
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggtgacccgt
tRNA gene sequence 
GGAGGCGTCTGGGTTCCTGGTGGTCCCCCCGGTCTTCAACACCGGTGAGGCCGAGCATCT
CGGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
gttcttcacg
Secondary structure (Cloverleaf model)
>C172000015	SeC	TCA
                   t      GCCA gttcttcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       T C C C
      T G G        C     TGAGGCCGAGCATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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