The detailed information of tRNA gene sequence


Sequence ID>C172000048
Genome IDCP015820
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBartonella apihabitans BBC0178 [CP015820]
Start position on genome 2352734
End posion on genome 2352639
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taagacattc
tRNA gene sequence 
GGAAGGGCTTTTCATCCGGTGATGGATGCGGCCTTCAAAGCCGTAAGGGGCCGTGAGACG
GTCTTTTATGGGTTCGACTCCCATGCTCTTCCGCCA
Downstream region at tRNA end position 
attattttca
Secondary structure (Cloverleaf model)
>C172000048	SeC	TCA
                   c      GCCA attattttca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     C - G          T C
                    T     T A C C C     A
      C C T        T      | | | | |     G
    G       A C T T       A T G G G     C
    G       | | + |                 T T
    T       T G G A
      G A          T     AAGGGGCCGTGAGACGGTCTTTT
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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