The detailed information of tRNA gene sequence


Sequence ID>C172000074
Genome IDCP017018
Search identical group
Phylum/ClassCampylobacterota
SpeciesCampylobacter pinnipediorum subsp. caledonicus M302/10/6 [CP017018]
Start position on genome 810258
End posion on genome 810351
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtagttgttt
tRNA gene sequence 
GGAGGATAAAGTGTTCTGGTGTCACTCACGGACTTCAAATCCGAGGACAGGGCGGTTGAC
CGTTTTGTGGGGAGTTCGATTCTCTCATCCTCTCgcc
Downstream region at tRNA end position 
attttttagt
Secondary structure (Cloverleaf model)
>C172000074	SeC	TCA
                   t      Cgcc attttttagt
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    A     C T C T C     A
      C T T        A      | + | | |     G
    T       G T G A       G G G A G     C
    G       | | | |                 T T
    G       C A C T
      T G T        C     GGACAGGGCGGTTGACCGTTTTGTG
                    A   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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