The detailed information of tRNA gene sequence


Sequence ID>C172000089
Genome IDCP017311
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHydrogenophaga sp. PBC [CP017311]
Start position on genome 2637994
End posion on genome 2637899
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cccggttcaA
tRNA gene sequence 
GGAAGGGAAACGACCCTGGTGGGTCGGCCGGGCTTCAAACCCGGTGGGTGGCGCCATGCG
TCGCCGGGTGGGTTCGACTCCCATTCCTTTCCGCC
Downstream region at tRNA end position 
gagcacttga
Secondary structure (Cloverleaf model)
>C172000089	SeC	TCA
                   A      CGCC gagcacttga
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    T       A G C A       G T G G G     C
    G         +                     T T
    G       G T C G
      T G G        G     TGGGTGGCGCCATGCGTCGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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