The detailed information of tRNA gene sequence


Sequence ID>C172000106
Genome IDCP017755
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus malaysiensis USMAA1020 [CP017754, CP017755]
Start position on genome 2292432
End posion on genome 2292527
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agggccatga
tRNA gene sequence 
GGAAGGCAGGCGTATCCGGTGATGCGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGCCG
TTCCCAGGTAGGTTCGACTCCTACTGCTTTCCGCCA
Downstream region at tRNA end position 
caagatttcc
Secondary structure (Cloverleaf model)
>C172000106	SeC	TCA
                   a      GCCA caagatttcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T C
                    G     C A T C C     A
      C C T        G      | | | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G A          G     TTGGGGGCGTCAGCCGTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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